EQUIPMENTS

visit the EPITRANS INFRASTRUCTURE

List of equipments

SEEDS STORAGE & PLANTS CULTURE

  • Two cold-rooms for seeds storage

  • Growth HOT chambers, in vitro and greenhouses facilities

Cellular biology

  • Berthold Technologies Nightshade LB985

              Mutants phenotyping and characterization

  • Arcturus XT Laser Capture / Cutting Microdissection (LCM)

  • Logos Biosystems X-Clarity transparency station

Molecular biology

  • Christ-Iso Lyophilisator, Lyocube Alpha

  • Eppendorf and Applied Biogen 384 thermocyclers park

  • LiCor Li-Cor 4300

              DNA fragment analyzer

  • Beckman Fx Biomek liquid handling automation

              Configured for high troughput DNA extraction

  • Fluidigm Access Array PCR system:

                    Targeted DNA NGS library preparation (48.48 IFC)

  • Covaris S220 Focused-ultrasonicator
  • Sage Science PippinHT

              High Throughput Size Selection for Next-Gen Sequencing

  • Agilent 2100 Bioanalyzer instrument

  • BIO-RAD Droplet DigitalTM PCR system : QX200TM AutoDGTM

  • LOGOS BIOSYSTEMS LUNA™ Automated Cell Counter

NGS technologies

  • Illumina Sequencers :MiSeqTM & NextSeq500TM systems

  • 10X Genomics Chromium single cell gene expression

BIOINFORMATICS

IPS2 informatics core provides resources and skills to support IPS2 teams in the field of Bioinformatics.

  • For small scale analysis we have access to local power data center of 276 processors, 780 Go memory and 3 GPU cards.

  • For large scale analysis we have access to a Data Center (GENOTOUL) of about 5000 cores (INTEL-2014, AMD-2012), 34 Tera Byte memory (3TB on a SMP machine) and data storage. The data center permits access to more than 200 softwares, web servers and virtual machines hosting infrastructure.

  • CLC station